|  |  |  |  | Figures‡ | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Dataset | Population* | Laboratory†| Public repository | Accession number | 1a,c; 2a | 1b,d; 2b | 1e | 3 | 4a | 4b | 5a | 5b |
Affymetrix Mouse Genome 430 2.0 data | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 | Spleen CD8 DCs (2) | MD/SCPK | GEO [95] | GSE9810 | X |  | X | X | X |  | X |  |
 | Spleen CD11b DCs (2) | MD/SCPK | GEO | GSE9810 | X |  | X | X | X |  | X |  |
 | Spleen pDCs (2) | MD/SCPK | GEO | GSE9810 | X |  | X | X | X |  | X |  |
 | Spleen NK cells (2) | MD/SCPK | GEO | GSE9810 | X |  | X |  | X |  |  |  |
 | Spleen CD8 T cells (2) | MD/SCPK | GEO | GSE9810 | X |  | X |  |  |  |  |  |
 | Spleen B cells (3) | MD/SCPK | GEO | GSE9810 | X |  | X |  | X |  |  |  |
 | Spleen CD4 T cells (2) | AYR | GEO | GSM44979; GSM44982 | X |  | X |  | X |  |  |  |
 | Spleen monocytes (3) | SB | NCI caArray [96] | NA | X |  | X |  |  |  | X |  |
 | Spleen monocytes (2) | BP | GEO | GSM224733; GSM224735 |  |  |  |  |  |  | X |  |
 | Peritoneal MΦ (1) | SA | GEO | GSM218300 |  |  |  |  |  |  | X |  |
 | BM-MΦ (2) | RM | GEO | GSM177078; GSM177081 |  |  |  |  |  |  | X |  |
 | BM-MΦ (1) | CK | GEO | GSM232005 |  |  |  |  |  |  | X |  |
 | BM-DCs (2) | RM | GEO | GSM40053; GSM40056 |  |  |  |  |  |  | X |  |
 | BM-DCs (2) | MH | GEO | GSM101418; GSM101419 |  |  |  |  |  |  | X |  |
Affymetrix Mouse U74Av2 data | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 | Spleen CD4 T cells (3) | CB/DM | GEO | GSM66901; GSM66902; GSM66903 |  |  |  |  | X |  |  |  |
 | Spleen B2 cells (2) | CB/DM | GEO | GSM66913; GSM66914 |  |  |  |  | X |  |  |  |
 | Spleen B1 cells (2) | CB/DM | GEO | GSM66915; GSM66916 |  |  |  |  | X |  |  |  |
 | Spleen NK cells (2) | FT | EBI ArrayExpress [97] | E-MEXP-354 |  |  |  |  | X |  |  |  |
 | Spleen CD4 DCs (2) | CRES | GEO | GSM4697; GSM4707 |  |  |  |  | X |  |  |  |
 | Spleen CD8 DCs (2) | CRES | GEO | GSM4708; GSM4709 |  |  |  |  | X |  |  |  |
 | Spleen DN DCs (2) | CRES | GEO | GSM4710; GSM4711 |  |  |  |  | X |  |  |  |
 | Spleen IKDCs (2) | FH | GEO | GSM85329; GSM85330 |  |  |  |  | X |  |  |  |
 | Spleen cDCs (2) | FH | GEO | GSM85331; GSM85332 |  |  |  |  | X |  |  |  |
 | Spleen pDCs (2) | FH | GEO | GSM85333; GSM85334 |  |  |  |  | X |  |  |  |
Affymetrix Human Genome U133 Plus 2.0 data | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â | Â |
 | Blood monocytes (3) | FRS | Authors' webpage [86] | NA |  | X | X |  |  | X |  | X |
 | Blood CD4 T cells (3) | FRS | Authors' webpage | NA |  | X | X |  |  | X |  |  |
 | Blood CD8 T cells (3) | FRS | Authors' webpage | NA |  | X | X |  |  | X |  |  |
 | Blood B cells (3) | FRS | Authors' webpage | NA |  | X | X |  |  | X |  |  |
 | Blood NK cells (3) | FRS | Authors' webpage | NA |  | X | X |  |  | X |  |  |
 | Blood neutrophils (3) | FRS | Authors' webpage | NA |  | X | X |  |  | X |  |  |
 | Blood pDCs (3) | CAKB | EBI ArrayExpress | E-TABM-34 |  | X | X | X |  | X |  | X |
 | Blood BDCA1 DCs (3) | CAKB | EBI ArrayExpress | E-TABM-34 |  | X | X | X |  | X |  | X |
 | Blood BDCA3 DCs (3) | CAKB | EBI ArrayExpress | E-TABM-34 |  | X | X | X |  | X |  | X |
 | Blood CD16 DCs (3) | CAKB | EBI ArrayExpress | E-TABM-34 |  |  |  |  |  | X |  | X |
 | PBMC-derived MΦ (2) | SYH | GEO | GSM109788; GSM109789 |  |  |  |  |  |  |  | X |
 | Monocyte-derived MΦ | LZH | GEO | GSM213500 |  |  |  |  |  |  |  | X |
 | Monocyte-derived DCs (3) | MVD | GEO | GSM181931; GSM181933; GSM181971 |  |  |  |  |  |  |  | X |