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Table 1 Self-matching test results for datasets compared using EXALT

From: Strategy for encoding and comparison of gene expression signatures

Query dataset

Number of query signatures

'Top hit' dataset

Number of 'top hit' signatures (% of query)

P valuea

GDS1011

4

GDS1011

4 (100%)

1.08 × 10-06

GDS1023

7

GDS1023

7 (100%)

3.00 × 10-06

GDS1030

6

GDS1030

6 (100%)

2.84 × 10-06

GDS1048

103

GDS1048

103 (100%)

2.84 × 10-07

GDS422

65

GDS422

65 (100%)

2.03 × 10-07

GDS430

6

GDS430

6 (100%)

5.55 × 10-07

GDS44

10

GDS44

10 (100%)

1.17 × 10-07

GDS592

777

GDS592

777 (100%)

1.08 × 10-06

GDS666

5

GDS666

5 (100%)

6.84 × 10-07

GDS690

2

GDS690

2 (100%)

6.48 × 10-07

GDS700

2

GDS700

2 (100%)

1.06 × 10-06

GDS711

15

GDS711

15 (100%)

1.45 × 10-07

GDS264

6

GDS264

6 (100%)

2.94 × 10-08

GDS279

2

GDS279

2 (100%)

1.84 × 10-06

GDS286

14

GDS286

14 (100%)

1.04 × 10-06

GDS292

6

GDS292

6 (100%)

1.17 × 10-05

GDS948

6

GDS948

6 (100%)

8.28 × 10-06

GDS955

14

GDS955

14 (100%)

2.51 × 10-06

GDS958

2

GDS958

2 (100%)

2.56 × 10-05

GDS961

1

GDS961

1 (100%)

2.65 × 10-07

  1. aAdjusted mean P value of all matching datasets. GDS, Gene Expression Omnibus dataset. EXALT, EXpression signature AnaLysis Tool.