Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains

Table 5 Analysis of inserted and deleted Sequence in 12 strains with respect to Rd KW20

Reference: Rd KW20	86-028	R2846	R2866	3655	PittAA	PittEE	PittGG	PittHH	PittII	22.4-21	22.1-21	R3021
Number of insertions	118	107	115	139	136	136	119	124	158	131	128	118
Median insert length (bp)	310	250	315	191	360	290	192	237	167	179	215	260
Mean insert length (bp)	2,076	1,199	2,041	1,248	1,245	961	1,419	1,408	879	1,274	959	1,869
Max insert length (bp)	55,275	13,119	53,044	15,789	20,222	9,796	28,306	32,587	11,085	14,983	10,810	58,706
Total insert length (bp)	244,946	128,290	234,704	173,459	169,310	130,683	168,840	174,636	138,906	166,923	122,721	220,535
Number of deletions	120	100	106	178	129	110	158	169	213	172	156	159
Median deleted length (bp)	276	268	359	274	288	264	195	205	246	317	357	340
Mean deleted length (bp)	1,254	1,354	1,128	900	1,339	1,340	816	874	708	990	898	938
Max deleted length (bp)	41,022	34,677	41,021	17,858	38,501	33,544	38,506	38,367	41,021	41,022	41,021	41,022
Total deleted length (bp)	150,491	135,377	119,612	160,262	172,723	147,451	128,936	147,689	150,857	170,262	140,021	149,079

ISSN: 1474-760X