Table 1 Results for 7-gram model using entire dataset
From: ngLOC: an n-gram-based Bayesian method for estimating the subcellular proteomes of eukaryotes
Location | Code | Precision | Sensitivity | FPR | Specificity | MCC |
|---|---|---|---|---|---|---|
Cytoplasm | CYT | 0.828 | 0.775 | 0.020 | 0.980 | 0.777 |
Cytoskeleton | CSK | 0.882 | 0.452 | 0.001 | 0.999 | 0.629 |
Endoplasmic Reticulum | END | 0.961 | 0.789 | 0.001 | 0.999 | 0.867 |
Extracellular | EXC | 0.949 | 0.939 | 0.021 | 0.979 | 0.921 |
Golgi Apparatus | GOL | 0.891 | 0.550 | 0.001 | 0.999 | 0.697 |
Lysosome | LYS | 0.953 | 0.855 | 0.000 | 1.000 | 0.902 |
Mitochrondria | MIT | 0.964 | 0.799 | 0.003 | 0.997 | 0.867 |
Nuclear | NUC | 0.807 | 0.906 | 0.048 | 0.952 | 0.821 |
Plasma Membrane | PLA | 0.883 | 0.958 | 0.043 | 0.957 | 0.892 |
Perixosome | POX | 0.938 | 0.748 | 0.000 | 1.000 | 0.836 |
Single-localized % overall accuracy | 89.03 | |||||
Multi-localized % overall accuracy (at least 1 correct) | 81.88 | |||||
Multi-localized % overall accuracy (both correct) | 59.70 | |||||