Skip to main content

Table 6 Results from high-fat diet experiment

From: Statistical tools for synthesizing lists of differentially expressed features in related experiments

 

Joint Bayesian model

Hwang et al.'s method

Rules

q

R(q)

O 11

O 1+

O +1

CI 95

DE

nonDE

Max

0.02

3.83

49

1,893

85

2.72-4.68

3,746

8,742

Double

0.07

2.04

226

3,059

452

1.90-2.21

3,746

8,742

  1. The joint model returns R(q max ) = 3.83 with an associated credibility interval [3.17-4.44]. The conditional model shows the same results (data not reported). The R(q2) is 2.04 and the CI is 1.90-2.21. The procedure indicates clearly a significant association between the two lists. Hwang et al.'s method calls 3,746 genes as differentially expressed (DE). All the genes called by our method are included in their list.
Back to article page

Genome Biology

ISSN: 1474-760X

Contact us