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Table 8 Effect of filter threshold setting on best match lineages for E. histolytica

From: DarkHorse: a method for genome-wide prediction of horizontal gene transfer

 

Filter threshold setting

 

0%

2%

5%

10%

20%

40%

Dictyostelium

694

831

1,096

1,485

1,901

2,083

Other Eukaryotes

2,353

2,236

2,011

1,682

1,347

1,267

Bacteria

433

431

413

377

308

213

Archaea

72

61

50

35

22

11

Total matches

3,552

3,559

3,570

3,579

3,578

3,574

  1. Some columns have slightly lower total numbers due to matches with uncultured organisms, which contain no lineage information but were not filtered out in this experiment.
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Genome Biology

ISSN: 1474-760X

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