Table 5 Numbers of amino acid runs and homogeneous runs
From: Distinct patterns of SSR distribution in the Arabidopsis thalianaand rice genomes
Amino acid* | Arabidopsis | Rice | ||||
|---|---|---|---|---|---|---|
|  | Number of amino acid runs | Number of H-runs†| % H-runs‡ | Number of amino acid runs | Number of H-runs†| % H-runs‡ |
Ala (4) | 327 | 43 | 13.1 | 7,477 | 3,318 | 44.4 |
Gly (4) | 853 | 171 | 20.0 | 6,349 | 2,461 | 38.8 |
Pro (4) | 865 | 132 | 15.3 | 3,727 | 1,221 | 32.8 |
Ser (6) | 1,997 | 322 | 16.1 | 2,862 | 742 | 25.9 |
Arg (6) | 103 | 9 | 8.7 | 1,636 | 311 | 19.0 |
Glu (2) | 831 | 370 | 44.5 | 1,387 | 734 | 52.9 |
Asp (2) | 424 | 246 | 58.0 | 1,269 | 697 | 54.9 |
Gln (2) | 451 | 169 | 37.5 | 1,077 | 634 | 58.9 |
Leu (6) | 275 | 20 | 7.3 | 882 | 286 | 32.4 |
Thr (4) | 215 | 64 | 29.8 | 479 | 264 | 55.1 |
Lys (2) | 394 | 183 | 46.4 | 314 | 174 | 55.4 |
His (2) | 146 | 87 | 59.6 | 303 | 218 | 71.9 |
Val (4) | 51 | 5 | 9.8 | 267 | 108 | 40.4 |
Asn (2) | 247 | 137 | 55.5 | 249 | 49 | 19.7 |
Phe (2) | 46 | 28 | 60.9 | 34 | 24 | 70.6 |
Cys (2) | 3 | 1 | 33.3 | 22 | 16 | 72.7 |
Met (1) | 18 | 18 | 100.0 | 13 | 13 | 100.0 |
Trp (1) | 0 | 0 | 0.0 | 7 | 7 | 100.0 |
Tyr (2) | 4 | 0 | 0.0 | 7 | 6 | 85.7 |
Ile (3) | 8 | 2 | 25.0 | 6 | 2 | 33.3 |