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Table 1 Fifteen repeat families containing domains shared with repeat families of different biological origin

From: Identifying repeat domains in large genomes

Repeat family

Number of domains

Length of domains

Percent shared

HARLEQUIN

34

6,245

0.9

MER52AI

32

5,375

0.76

HERVL

4

5,117

0.9

ERVL

4

5,117

0.89

HUERS-P3

31

5,106

0.57

LOR1I

54

4,034

0.5

HUERS-P3B

67

3,791

0.51

HERVE

9

3,463

0.44

HERVG25

50

3,431

0.49

HERV35I

54

2,933

0.42

MER51I

45

2,914

0.37

MER4I

48

2,896

0.45

HERVIP10FH

25

2,782

0.54

PABL_AI

52

2,665

0.53

  1. The list is sorted by the total length of shared domains. See Additional data file 4 for the complete table.
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Genome Biology

ISSN: 1474-760X

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