From: Computational prediction of human metabolic pathways from the complete human genome
Class | Subclass | Pathway | EcoCyc | AraCyc |
---|---|---|---|---|
Biosynthesis | Polyamines | Betaine biosynthesis | * | * |
 |  | Betaine biosynthesis II |  |  |
 |  | Spermine biosynthesis |  | * |
 |  | Polyamine biosynthesis II |  |  |
 |  | Ornithine spermine biosynthesis |  | * |
 |  | Polyamine biosynthesis | * | * |
 |  | UDP-N-acetylgalactosamine biosynthesis |  | * |
 |  | UDP-N-acetylglucosamine biosynthesis | * |  |
 | Nucleotides | De novo biosynthesis of purine nucleotides | * |  |
 |  | Purine and pyrimidine metabolism |  |  |
 |  | Purine biosynthesis 2 |  |  |
 |  | De novo biosynthesis of pyrimidine ribonucleotides | * |  |
 |  | Salvage pathways of pyrimidine ribonucleotides | * |  |
 |  | De novo biosynthesis of pyrimidine deoxyribonucleotides | * |  |
 |  | Salvage pathways of pyrimidine deoxyribonucleotides | * |  |
 | Fatty acids and lipids | Fatty acid elongation - saturated | * | * |
 |  | Fatty acid biosynthesis - initial steps | * | * |
 |  | Phospholipid biosynthesis | * | * |
 |  | Phospholipid biosynthesis II |  |  |
 |  | Mevalonate pathway |  | * |
 |  | Triacylglycerol biosynthesis |  | * |
 | Cofactors, prosthetic groups, electron carriers | Heme biosynthesis II |  |  |
 |  | NAD biosynthesis II |  |  |
 |  | NAD biosynthesis III |  |  |
 |  | NAD phosphorylation and dephosphorylation | * |  |
 |  | Pyridine nucleotide biosynthesis | * | * |
 |  | Pyridine nucleotide cycling | * |  |
 |  | Glutathione-glutaredoxin redox reactions | * |  |
 |  | Glutathione biosynthesis | * | * |
 |  | Thioredoxin pathway | * | * |
 |  | Pantothenate and coenzyme A biosynthesis | * | * |
 |  | Pyridoxal 5'-phosphate salvage pathway | * | * |
 |  | FormylTHF biosynthesis | * | * |
 |  | Polyisoprenoid biosynthesis | * | * |
 |  | Methyl-donor molecule biosynthesis | * |  |
 | Cell structures | Colanic acid building blocks biosynthesis | * | * |
 |  | GDP-mannose metabolism | * | * |
 |  | Mannosyl-chito-dolichol biosynthesis |  | * |
 |  | UDP-N-acetylglucosamine biosynthesis | * |  |
 | Carbohydrates | GDP-D-rhamnose biosynthesis |  |  |
 |  | Gluconeogenesis | * | * |
 |  | Mannosyl-chito-dolichol biosynthesis |  | * |
 |  | Trehalose degradation - low osmolarity | * | * |
 | Aminoacyl-tRNAs | tRNA charging pathway | * | * |
 | Amino acid biosynthesis | Alanine biosynthesis II |  | * |
 |  | Arginine biosynthesis 4 |  | * |
 |  | Citrulline biosynthesis |  |  |
 |  | Asparagine biosynthesis I |  |  |
 |  | Aspartate biosynthesis II |  |  |
 |  | Cysteine biosynthesis II |  |  |
 |  | Glutamate biosynthesis II |  | * |
 |  | Glutamine biosynthesis II |  |  |
 |  | Glycine cleavage | * |  |
 |  | Glycine biosynthesis I | * | * |
 |  | Methionine salvage pathway |  |  |
 |  | Proline biosynthesis I | * | * |
 |  | Serine biosynthesis | * | * |
 |  | Tyrosine biosynthesis II |  |  |
Degradation | Sugars and polysaccharides | Lactose degradation 4 | Â | * |
 |  | Lactose degradation 2 |  | * |
 |  | Sucrose degradation III |  |  |
 |  | Galactose metabolism | * | * |
 |  | Glucose 1-phosphate metabolism | * | * |
 |  | Glycogen degradation | * | * |
 |  | Mannose degradation | * |  |
 |  | Non-phosphorylated glucose degradation |  | * |
 |  | UDP-glucose conversion |  | * |
 |  | Ribose degradation | * | * |
 |  | Trehalose degradation - low osmolarity | * | * |
 | Sugar derivatives | Lactate oxidation |  |  |
 |  | Mannitol degradation | * |  |
 |  | Sorbitol degradation | * |  |
 |  | Glucosamine catabolism | * |  |
 | Other degradation | Removal of superoxide radicals | * | * |
 |  | Methylglyoxal degradation |  |  |
 | Nucleosides and nucleotides | (Deoxy)ribose phosphate metabolism | * | * |
 |  | Periplasmic NAD degradation |  |  |
 | Fatty acids | Fatty acid oxidation pathway | * | * |
 |  | Triacylglycerol degradation |  | * |
 |  | Lipases pathway |  | * |
 | Carboxylates, other | Propionate metabolism - methylmalonyl pathway | * |  |
 |  | 2-Oxobutyrate degradation |  |  |
 |  | Acetate degradation | * | * |
 |  | Pyruvate metabolism |  |  |
 |  | N-acetylneuraminate degradation |  |  |
 | C1 compounds | Carbon monoxide dehydrogenase pathway |  | * |
 |  | Serine-isocitrate lyase pathway |  | * |
 | Amino acids, amines | Alanine degradation 3 |  | * |
 |  | Arginine degradation III |  |  |
 |  | Arginase degradation pathway |  |  |
 |  | Arginine proline degradation |  | * |
 |  | Asparagine degradation 1 |  | * |
 |  | Aspartate degradation 1 |  |  |
 |  | Malate/aspartate shuttle pathway |  |  |
 |  | L-cysteine degradation IV |  | * |
 |  | L-cysteine degradation VI |  |  |
 |  | Cysteine degradation I |  |  |
 |  | Glutamate degradation I |  | * |
 |  | Glutamate degradation IV |  |  |
 |  | Glutamate degradation VII |  | * |
 |  | Glutamine degradation 1 |  |  |
 |  | Glutamine degradation II |  |  |
 |  | Glycine degradation II |  |  |
 |  | Glycine degradation I |  |  |
 |  | Histidine degradation III |  |  |
 |  | Histidine degradation I |  |  |
 |  | Homocysteine degradation I |  |  |
 |  | Isoleucine degradation I |  | * |
 |  | Isoleucine degradation III |  |  |
 |  | Leucine degradation II |  |  |
 |  | Leucine degradation I |  | * |
 |  | Lysine degradation I |  | * |
 |  | Methionine degradation 1 |  | * |
 |  | 4-Hydroxyproline degradation |  | * |
 |  | S-adenosylhomocysteine degradation |  |  |
 |  | Phenylalanine degradation I |  |  |
 |  | Proline degradation III |  |  |
 |  | Proline degradation II |  |  |
 |  | L-serine degradation | * | * |
 |  | Threonine degradation 2 |  |  |
 |  | Tryptophan degradation I |  |  |
 |  | Tryptophan degradation III |  | * |
 |  | Tryptophan kynurenine degradation |  |  |
 |  | Tyrosine degradation |  |  |
 |  | Valine degradation I |  | * |
 | Alcohols | Aerobic glycerol degradation II |  | * |
 |  | Glycerol metabolism | * | * |
 |  | Glycerol degradation I | * |  |
 |  | Ethanol degradation | * |  |
 | Amines and polyamines, other | Citrulline degradation |  |  |
 |  | N-acetylglucosamine, N-acetylmannosamine and N-acetylneuraminic acid dissimilation | * | * |
 |  | Glucosamine catabolism | * |  |
Energy metabolism | Â | Glycolysis 3 | Â | * |
 |  | Glycolysis | * | * |
 |  | Glycolysis 2 |  |  |
 |  | Glyceraldehyde 3-phosphate degradation |  | * |
 |  | Non-oxidative branch of the pentose phosphate pathway | * | * |
 |  | Oxidative branch of the pentose phosphate pathway | * | * |
 |  | Aerobic respiration - electron donors reaction list | * |  |
 |  | Pyruvate dehydrogenase | * | * |
 |  | TCA cycle - aerobic respiration | * | * |
 |  | Entner-Doudoroff pathway | * |  |