From: A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
Functional group/ complex | Lost KOGs* | ||||||
---|---|---|---|---|---|---|---|
 | Hs | Dm | Ce | Coelomates/ Ecdysozoa | Animals | Yeasts | Fungi-Ec |
Mitochondrial ribosomal proteins | 3331, 3435/ 3331, 3435 | 3505, 4600, 4612/ None | 3505, 4122, 4600, 4612/ 4122 | None/ 3505, 4600, 4612 | 0899, 0938, 1740, 3254, 3278, 4844 | Â | 0408,1686, 1708, 4707 |
Spliceosome, including putative associated proteins | Â | 1847, 1960/ 1847 | 1902, 1960, 2991, 3414 | None/ 1960 | Â | Â | 0105, 0107, 0117, 1365, 1588, 1676, 1847, 1996, 2191, 2242, 2548, 2991, 4207, 4211 |
Exosome | Â | 1004, 1613 | Â | Â | Â | Â | Â |
Replication origin-recognition complex | Â | Â | 2228, 2538, 4557 | Â | Â | Â | 4557 |
Mismatch repair system | Â | 0218, 0220, 221, 1977 | 0218, 1977, 4120 | None/ 0218, 1977 | Â | Â | Â |
Ubiquitin system/ proteasome-signalosome components | Â | 0170, 0428, 1814, 4116, 4185, 4412 | 0168, 0170, 0320, 0421, 0423, 1364, 1571, 1645, 1871, 1873, 1887, 2561, 2932, 3061, 3250, 3268, 4146, 4159, 4275, 4412, 4413, 4414, 4692, 4761 | None/ 0170, 4412 | Â | 0823, 1645, 1734 | 0311, 0423, 0427, 0827, 0895, 1100, 1139, 1464, 1571, 1812, 1887, 2561, 2932, 3011, 3050, 3268, 4185, 4248, 4265, 4275, 4413, 4414, 4427, 4642, 4692, 4761 |
NADH-ubiquinone oxido-reductase/ NADH dehydro-genase | Â | Â | Â | Â | Â | Â | 2865, 2870, 3256, 3300, 3365, 3382, 3389, 3426, 3446, 3456, 3458, 3466, 3468, 4009, 4662, 4668, 4669, 4770, 4845 |