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Table 6 Potential NDEs

From: Genome-wide patterns of carbon and nitrogen regulation of gene expression validate the combined carbon and nitrogen (CN)-signaling hypothesis in plants

NDEs

Element name

Ferredoxin C-elements

Protein synthesis C-elements

Total p-value

  

KMSAGAG (C3)

WKGGGCC (C6)

GGCCSAW (C7)

GDNTTGKAM (C10)

 

Ferredoxin-related motifs

CHHNAACHRA

N1

NS

0.0222

0.0344

NS

0.046

   

N1C6

N1C7

  

Protein synthesis related motifs

TNNDNVNACAACA

N2

0.0281

0.0207

0.0268

0.0037

<0.005

  

N2C3

N2C6

N2C7

N2C8

 
  1. For nucleotide abbreviations see the foonote for Table 5.
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Genome Biology

ISSN: 1474-760X

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