Table 2 Sequence analysis of stress cDNA libraries
From: Characterizing the stress/defense transcriptome of Arabidopsis
Library | Aoz (%) | Coz (%) | APP (%) | VPP (%) | MJ (%) | Rpm (%) | DC (%) | SA (%) | Total |
Sequenced cDNAs | 387 | 80 | 137 | 252 | 91 | 235 | 159 | 120 | 1461 |
Genes identified | 257 (66) | 69 (86) | 111 (81) | 218 (87) | 57 (63) | 165 (68) | 113 (71) | 68 (57) | 1058 (72) |
No EST match | 46 (18) | 11 (16) | 19 (17) | 29 (13) | 7 (12) | 32 (19) | 21 (19) | 13 (19) | 178 (17) |
Known function | 182 (71) | 53 (77) | 83 (75) | 155 (71) | 42 (74) | 120 (73) | 78 (69) | 51 (75) | 764 (72) |
Unknown function | 75 (29) | 16 (23) | 28 (25) | 63 (29) | 15 (26) | 45 (27) | 35 (31) | 17 (25) | 294 (28) |